ETS family

General information Species distribution Numeration assumed Sequence conservation 3D conservation Contacts with DNA

Conserved sequence features

   Domains of ETS family are highly conservative both in structure and sequence. According to the alignment derived from Pfam database with all fragments removed, there can be picked out several most conserved residues:

   On the scheme above, amino acid residues of ETS domain sequence are highlighted according to their conservation level, while not conserved residues are shown as X, the subscript telling the possible number of such AA residues. Also the scheme represents distribution of secondary structure elements along the sequence. The coloured balls display the type of contact or function of the particular residue, which might explain its conservation. Only contacts made by sidechain atoms are shown, as the ones made by backbone atom are assumed not important in terms of conservation.

For ETS fingerprint see also ==SPRINT==>

Download ets_pfam_revised.msf

© A.Grishin, A.Alexeevski, A.Karyagina, S.Spirin

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