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Nucleic Acid-Protein Interaction DataBase (NPIDB) project
The database NPIDB (Nucleic acid Protein Interaction DataBase) contains
information derived from structures of DNA-protein and RNA-protein complexes
extracted from Protein
Data Bank (PDB) (1932 complexes in the end of 2007).
It is equipped with a web-interface
and a set of tools for extracting biologically meaningful characteristics of complexes.
We would deeply appreciate all your ideas and suggestions
regarding our project.
We are committed to satisfy all potential database users in order to:
- Provide an essential information on structural features of
DNA-protein and RNA-protein interaction
for the users who need to get acquainted with the problem.
- Give an effective access to the reasonably structured information about
all DNA-protein and RNA-protein complexes containing in
- Allow all visitors a quick access to our own research.
Sergey Vasil'ev, Rimma Ledneva,
The description of a preliminary version called DPIDB (DNA-protein interaction database):
Biofizika 2001, 46 (6):10101021.
The description of the current version:
Bioinformatics 2007, 23 (23), 32473248
The work is supported by the Russian Foundation of Basic Research, grants 06-07-89143 and 06-04-49558, and INTAS, grant 05-1000008-8028
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